Antscan, a first-of-its-kind platform, provides access to never-before-seen insights about the anatomy of ants through micrometer-resolution digital reconstructions. Boston University researchers Evan Economo and Julian Katzke are leading the Antscan project, which has produced the most expansive dataset. As shown by the remarkable species diversity in this dataset, this dataset is an invaluable resource for science, education, and community engagement.
Yet, the Antscan dataset, including 792 species spanning 212 genera, constitutes an enormous advance in sampling most of described ant diversity. To do that, the Antscan team used synchrotron micro-CT technology to scan over 2,200 preserved ant specimens. They performed the scans at the Karlsruhe Institute of Technology’s synchrotron light source facility in Germany. The resulting high-resolution images provide unprecedented views into ants’ internal structures, deepening understanding of the biology of these fascinating creatures.
A New Era in Morphological Studies
Antscan represents a global shift in how the discipline of morphology is practiced. It’s roughly on the order of the disruption that the big DNA sequencing projects produced. The new platform allows users to interact with the data thanks to a new, online open data portal. Here, they can rotate, zoom in, and virtually dissect ant specimens! This collaborative and creative approach isn’t just a way of sharing knowledge about ant anatomy – it’s opening up new worlds of research and education.
>Evan Economo highlighted the transformative potential of Antscan, stating, > “This is kind of like having a genome for shape.” This mood has inspired the dataset’s potential to support evolutionary studies at scales that span the entire ant family tree. Antscan provides a uniform, annual, and publicly funded corpus of high-resolution images. This new resource will allow researchers to create detailed measurements of different anatomical features, including just how much of an investment ants make in their protective exoskeleton.
Julian Katzke emphasized the versatility of the dataset, noting its broad applicability: “It is an extremely rich dataset that can be used for a number of different applications in science, but for the arts and outreach and education.” This breadth of potential usage showcases the vast capabilities of Antscan and demonstrates its ability to be an extremely useful tool outside of academic research.
Advanced Technology Behind Antscan
As the largest-ever creation of an Antscan dataset, this project required cutting-edge technology and methodologies. To create images like this, the team used the powerful, bright, and coherent X-rays generated by a particle accelerator to image specimens with extraordinarily high detail. We trained neural networks to automate detection, annotation, and morphometric analysis of anatomical structures. The new approach allowed us to greatly improve the speed and quality of our data processing.
Marek Borowiec remarked on the future implications of Antscan, stating, “The full advantage of this dataset will be realized when these methods are deployed.” Researchers are itching to use this new, cutting-edge technology. We hope that Antscan will lead to many more exciting discoveries, not just in ant morphology, but across the entire tree of life!
This reflects upon the dataset as both a permanent record and documentation of the architecture of life. Future scientists can return to and query this anatomical time capsule to reveal additional insights of immense value. This permanence is important for future long-term studies of biodiversity and evolutionary trends across the ant family and beyond.
Broader Implications and Future Applications
The implications of Antscan go beyond the realm of morphological research. David Blackburn pointed out that increased access to museum collections—whether physical or digital—enhances their value: “The more people that access and work with the stuff in our museums, whether it’s physically or digitally, the greater value they add.” By democratizing access to detailed anatomical information, Antscan fosters a spirit of collaboration and discovery among scientists, educators, and the public.
Evan Economo had a wonderful short talk sharing his inspiring vision for how this dataset could be used. Specifically, he’s most excited about the applications to robotics and engineering tasks. He stated, “I would really like to see these big libraries of organismal form one day be useful for people in robotics and engineering, so they can mine these data for new kinds of biomechanical designs.” This lens beautifully highlights the interdisciplinary nature of Antscan’s contributions. Its promise extends beyond biology, as examples from the world of technology show what other innovations it might inspire.
>Vladimir Blagoderov praised the efforts behind Antscan: “It is an impressive piece of work.” Field experts have seen the value of this project and recognized TWMA’s importance. Their recognition reflects the enormous significance of what it adds to our understanding of ant morphology.

